Stegle Lab

Open-source tools developed by the Stegle Lab.

Software

Bicycle

Publication
GitHub

Cell2Location

Publication
GitHub

Cell2Fate

Publication
GitHub

CellRegMap

Publication
GitHub

DeepRVAT

Publication
GitHub

MEFISTO

Publication
GitHub

MOFA-FLEX

Publication
GitHub

MUON

Publication
GitHub

scDALI

Publication
GitHub

scDORI

Publication
GitHub

SDRranger

Publication
GitHub

segger

Publication
GitHub

SpatialData

Publication
GitHub

SpatialDE

Publication
GitHub

More software available on GitHub: https://github.com/bioFAM and https://github.com/PMBio/